Index A | B | C | D | E | F | G | H | I | L | M | N | O | P | R | S | T | V | Z A ApplyCalculator ApplyCalculator() (in module mlipx) ASE ASEKeys (class in mlipx.abc) B BFGS (mlipx.abc.Optimizer attribute) BuildASEslab BuildASEslab() (in module mlipx) BuildBox BuildBox() (in module mlipx) C CalculateFormationEnergy CalculateFormationEnergy() (in module mlipx) check() (mlipx.abc.DynamicsObserver method) compare() (mlipx.abc.ProcessAtoms static method) CompareCalculatorResults CompareCalculatorResults() (in module mlipx) CompareFormationEnergy CompareFormationEnergy() (in module mlipx) ComparisonResults (class in mlipx.abc) D data (in module mlipx) (mlipx.abc.ProcessAtoms attribute) (mlipx.abc.ProcessFrames attribute) data_id (mlipx.abc.ProcessAtoms attribute) DVC DynamicsModifier (class in mlipx.abc) DynamicsObserver (class in mlipx.abc) E elements (in module mlipx) end_temperature (in module mlipx) EnergyVolumeCurve EnergyVolumeCurve() (in module mlipx) EvaluateCalculatorResults EvaluateCalculatorResults() (in module mlipx) F figures (mlipx.abc.ComparisonResults attribute) (mlipx.abc.ProcessAtoms property) FilterAtoms FilterAtoms() (in module mlipx) filtering_type (in module mlipx) FIRE (mlipx.abc.Optimizer attribute) formation_energy (mlipx.abc.ASEKeys attribute) frames (in module mlipx), [1] (mlipx.abc.ComparisonResults attribute) (mlipx.abc.ProcessAtoms property) frames() (in module mlipx) frames_path (in module mlipx) (mlipx.abc.ProcessAtoms attribute) G get_calculator() (mlipx.abc.NodeWithCalculator method) get_molecular_dynamics() (mlipx.abc.NodeWithMolecularDynamics method) get_spec() (mlipx.abc.NodeWithCalculator method) GIT H HomonuclearDiatomics HomonuclearDiatomics() (in module mlipx) I initialize() (mlipx.abc.DynamicsObserver method) interval (in module mlipx) IPSuite isolated_energies (mlipx.abc.ASEKeys attribute) L LangevinConfig LangevinConfig() (in module mlipx) LBFGS (mlipx.abc.Optimizer attribute) LoadDataFile LoadDataFile() (in module mlipx) M main.py MaximumForceObserver MaximumForceObserver() (in module mlipx) mlflow MLIP mlipx.abc module models.py modify() (mlipx.abc.DynamicsModifier method) module mlipx.abc MolecularDynamics MolecularDynamics() (in module mlipx) N name (mlipx.abc.DynamicsModifier property) (mlipx.abc.DynamicsObserver property) NEBinterpolate NEBinterpolate() (in module mlipx) NEBs NEBs() (in module mlipx) Node NodeWithCalculator (class in mlipx.abc) NodeWithMolecularDynamics (class in mlipx.abc) O Optimizer (class in mlipx.abc) P packmol paraffin PermutationInvariance PermutationInvariance() (in module mlipx) PhaseDiagram PhaseDiagram() (in module mlipx) plots (in module mlipx), [1] PourbaixDiagram PourbaixDiagram() (in module mlipx) ProcessAtoms (class in mlipx.abc) ProcessFrames (class in mlipx.abc) R rdkit2ase RelaxAdsorptionConfigs RelaxAdsorptionConfigs() (in module mlipx) results (in module mlipx), [1], [2], [3], [4], [5] RotationalInvariance RotationalInvariance() (in module mlipx) run() (in module mlipx) S Smiles2Conformers Smiles2Conformers() (in module mlipx) start_temperature (in module mlipx) StructureOptimization StructureOptimization() (in module mlipx) T TemperatureRampModifier TemperatureRampModifier() (in module mlipx) total_steps (in module mlipx) TranslationalInvariance TranslationalInvariance() (in module mlipx) V VibrationalAnalysis VibrationalAnalysis() (in module mlipx) Z ZnDraw ZnTrack